Image analysis

Synonyms
General image analysis

pyBPDL

Collection
Description

The Binary Pattern Dictionary Learning (BPDL) package is suitable for image analysis on a set/sequence of images to determine an atlas of a compact region. In particular, the application can be maping gene activation accross many samples, brain activations in a time domain, etc.

has function
Image registration
Image analysis
Shape features
Atlas

ROI Measure for Icy

Component
Description

ROI measurement plug-in for Icy.

has topic
Bioimage informatics
has function
Image analysis
need a thumbnail

NanoJ

Collection
Description

Set of Tools for super resolution microscopy

has topic
Live sample imaging
Fluorescence microscopy
Super-resolution microscopy
has function
Image registration
Image analysis
Image processing
Image correction

3D vessel segmentation of synchrotron phase contrast tomography

Workflow
Description

This workflow describes a semi-automatic image segmentation procedure for 3D reconstructions of the coronary arterial tree, after which how different morphometric features are automatically extracted, including vessel lumen diameter of the three main coronaries.

has topic
Bioimage informatics
Tomography
Machine learning
has function
Image analysis
Interactive segmentation
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