TrakEM2

Menu of TrakEM2
Type
Component
Author
Albert Cardona
Stephan Saalfeld
Curtis Rueden
Requires
ImageJ
3D Viewer
Execution Platform
Linux
Mac
Windows
Implementation Type
library
plugin
Supported image dimension
2D
3D
Interaction Level
Automated
Manual
Semi-automated
License/Openness
Free and open source
License
GPLv3
Description

TrakEM2 is an ImageJ plugin for morphological data mining, three-dimensional modeling and image stitching, registration, editing and annotation (Fiji comes with TrakEM2). It supports arbitrary-sized datasets. 

has function
Alignment construction
Image registration
Affine registration
Rigid registration
Deformable registration
Object feature extraction
Image annotation
Image stitching
Affine transformation
Geometric distortion correction
Image visualisation
has topic
Electron microscopy
Entry Curator
Moritz
Post date
10/11/2013 - 15:08
Last modified
03/16/2022 - 07:26
Download Page
TrakEM2
Documentation Link
Documentation
Reference Publication Link
10.1371/journal.pone.0038011
Backlinks
Alignment of FIBSEM or SBFSEM images/Component
Trakem2 lens distortion correction/Component
Reconstruct Reader/Component
3View import list/Component