QuantiFish

Type
Author
Stirling David orcid.org/0000-0001-6802-4103
Execution Platform
Implementation Type
Programming Language
Supported image dimension
Interaction Level
License/Openness
License
GNU General Public License v3.0
Description

QuantiFish is a quantification program intended for measuring fluorescence in images of zebrafish, although use with images of other specimens is possible. This package is geared towards analysis of fluorescent infection models. The software is designed to automate processing of images of single fish, and outputs results as a .csv file. Alongside measures of total fluorescence above a threshold, this package also introduces several measures for dissemination and distribution of fluorescence throughout the specimen.

has biological terms
Last modified
01/06/2021 - 19:51