Contents

Image Title Category Type Description Updated
need a thumbnail ImarisColoc Software Component 09/13/2017 - 12:09
need a thumbnail CorrectIlluminationCalculate Software Component 09/13/2017 - 12:09
need a thumbnail Copy Pixel Size Software Component

This plugin copies the pixel size from the calibration of one image or stack to a second image or stack. This allows one to copy the spatial calibration from one stack to another.

A second dialog allows to enter the scale factors.

10/16/2019 - 12:56
CalculateImageOverlap Software Component 10/17/2019 - 17:15
need a thumbnail Colocalization Test Software Component

DEPRECATED

Use coloc 2!

12/20/2018 - 18:39
need a thumbnail Graylevel Watershed for ImageJ Software Component

The grayscale watershed segmentation is useful to segment particles in contact when the model of shape is unknown a priori.

10/18/2019 - 14:29
need a thumbnail Continuous-Time ARMA Identification Software Component 09/13/2017 - 12:09
need a thumbnail OverlayOutlines Software Component

OverlayOutlines is a module from CellProfiler to place outlines of objects over a desired image.

10/16/2019 - 12:43
need a thumbnail Matlab importer (Icy) Software Component

Import Matlab *.mat files as sequences in Icy.

10/16/2019 - 17:28
need a thumbnail ICY Fill holes in ROI Software Component

Fills the holes in all the ROI of the active sequence (also works in Protocols).

04/29/2023 - 16:26
need a thumbnail Slice Labeler (ImageJ) Software Component 03/02/2020 - 12:35
Volume Viewer Software Component

3D reslicing and threshold-enabled 3D visualization.

10/17/2019 - 18:27
need a thumbnail MeasureCorrelation (CellProfiler) Software Component

not available anymore in version 3.0 and up?

03/02/2020 - 16:24
need a thumbnail CellProfiler Crop Software Component

Crop crops or masks an image.

This module crops images into a rectangle, ellipse, an arbitrary shape provided by you, the shape of object(s) identified by an Identify module, or a shape created using a previous Crop module in the pipeline.

10/16/2019 - 13:49
need a thumbnail Optical Flow - Horn-Schunck (Icy) Software Component 03/02/2020 - 21:34
Track Processor Color Software Component

Track Processor to color tracks in the Track Manager

10/17/2019 - 10:24
need a thumbnail Track Processor Zero Origin Software Component

Translate the tracks so that first detection is at 0,0,0 location.

04/29/2023 - 17:26
need a thumbnail ICY Connected Component Painter Software Component

Add a layer on an image to display the detections

05/02/2023 - 18:38
need a thumbnail Tracking Performance Measures Software Component 04/29/2023 - 17:03
need a thumbnail Icy Ruler Helper Software Component 10/18/2019 - 13:50